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18 Apr 2024
@andreas_tille:matrix.orgAndreas Tille Charles Plessy: Please note that I've fixed the bug in bcftools just reported after you injected new upstream. (Just to make sure you notice that I continued your not yet finished work from yesterday) 15:31:18
19 Apr 2024
@charles_at_oist:matrix.orgCharles Plessy* Thanks @Andreas. Can you also push your upstream and pristine-tar branches? I forgot to push mine and then messed with my repos so I can not do it anymore.00:15:38
@charles_at_oist:matrix.orgCharles Plessy* Thanks @Andreas. Can you also push your upstream and pristine-tar branches? I forgot to push mine and then messed with my repos so I can not do it anymore.04:23:51
@charles_at_oist:matrix.orgCharles Plessy* Thanks @Andreas. Can you also push your upstream and pristine-tar branches? I forgot to push mine and then messed with my repos so I can not do it anymore.04:24:00
@andreas_tille:matrix.orgAndreas Tille Any volunteer to tackle bug #1067374 of blasr "multiple definition of `main';" ? 06:13:56
@andreas_tille:matrix.orgAndreas Tille Michael R. Crusoe: Is there any chance to keep vg. Currently it is blocking t64 transition for whatever reason since its not available for 32bit architectures anyway. IMHO it would help if we could get build any version (preferably the latest) and Build-Depend architecture-is-64-bit. 06:21:48
@andreas_tille:matrix.orgAndreas Tille
In reply to @pjotrp-linux:matrix.org
I'll have time to look at packages again. I think freebayes is the main problem right now.
Definitely and it would be great if you could work on issue #786 since it is blocking t64 transition.
06:30:25
@pjotrp-linux:matrix.orgpjotrp Andreas Tille: I am looking 09:15:11
@pjotrp-linux:matrix.orgpjotrpthe problem is in vcflib using gcc13, but I can't replicate the issue on guix just yet.11:05:33
@pjotrp-linux:matrix.orgpjotrpI was expecting that zig would have been part of Debian by now. Anyone know why it is not even listed?11:06:18
@andreas_tille:matrix.orgAndreas Tille What is zig ? 12:03:29
@ssatta:matrix.orgssattahttps://ziglang.org/12:06:06
@andreas_tille:matrix.orgAndreas Tille

Ahh:

$ wnpp-check zig | grep 'zig$'
(ITP - #995670) https://bugs.debian.org/995670 zig
12:08:47
@andreas_tille:matrix.orgAndreas TilleSeems some people are considering it but its not finished.12:09:04
@ssatta:matrix.orgssattahttps://github.com/dryzig/zig-debian exists but apparently not trivial13:25:36
@pjotrp-linux:matrix.orgpjotrpah thanks. The blocker appears around licensing? https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=101228614:04:51
@pjotrp-linux:matrix.orgpjotrpthat is a bit weird. I think they gave up. Zig does have an oddity in that it bootstraps from a WASM compiler. That is why Guix is stuck at 0.1014:05:48
@emollier:matrix.orgemollierI've been away a while, trying to avoid aggravating a strain. I better equiped my desk now; it looks like I still know how to proceed to an upload. :)16:13:16
20 Apr 2024
@weepingclown:matrix.orgweepingclownAndreas, congrats!02:12:42
@andreas_tille:matrix.orgAndreas TilleThanks a lot!04:45:51
@ssatta:matrix.orgssattaYes, congratulations Andreas 👍️07:27:48
@emollier:matrix.orgemollierSeconded, congratulations! :)08:05:56
@emollier:matrix.orgemollier... weird, is it just me or is there bad signature on the email with election results?08:54:47
@foreveremain:matrix.orgJim Procter Favorite quote fron your platform Andreas Tille: "if you think single maintainership of packages is the right way to cope with future problems for Debian you should probably rank me below "None of the above"' 09:08:41
@pjotrp-linux:matrix.orgpjotrpI released a new version of vcflib. Also some upstream build patches for wfa2lib. https://github.com/vcflib/vcflib/releases/tag/v1.0.10. We should be able to fix freebayes for Debian now.10:09:10
@pjotrp-linux:matrix.orgpjotrpAlso wfa2lib has a new release with ctest support. https://github.com/smarco/WFA2-lib/releases/tag/v2.3.511:24:23
@mr-c:matrix.orgMichael R. CrusoeShall I merge https://salsa.debian.org/med-team/policy/-/merge_requests/3 or send a notification to debian-devel first? 18:35:06
@andreas_tille:matrix.orgAndreas TilleI'm fine with a merge and in principle its the policy of a team with specific needs. Discussion migth be never wrong but I do not consider it absolutely necessary.18:49:37
22 Apr 2024
@pjotrp-linux:matrix.orgpjotrpI unbundled vcflib from freebayes09:37:21
@pjotrp-linux:matrix.orgpjotrpIs it possible we add the include files for fastahack and smithwaterman packages? That way I can unbundle those10:29:05

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