24 Aug 2018 |
emdupre | 🎉 ok ! It took me like a day to come around to that idea, but I think it make sense. then yes, the organization / distribution becomes the next practical q.. | 16:17:01 |
@teonbrooks:matrix.org | oh, i was just thinking annotations, not all derivatives | 16:17:37 |
@teonbrooks:matrix.org | sorry, jumped the gun in agreeing too soon | 16:17:49 |
@teonbrooks:matrix.org | lol | 16:17:51 |
@teonbrooks:matrix.org | let me think on it a bit longer | 16:18:52 |
mainakjas | I'm wondering if it's wise to redefine something that is already deffined in BEP003 ... | 16:18:57 |
emdupre | nothing is defined in BEP003 ! that's for today 😆 | 16:19:26 |
emdupre | but do you think this is a redefinition, mainakjas ? | 16:19:38 |
@teonbrooks:matrix.org | 😂 | 16:19:48 |
@teonbrooks:matrix.org | whoa, my emojis are huge! | 16:19:57 |
mainakjas | teonbrooks: bigger emojis won't convince me faster :) | 16:23:53 |
dorahermes | I just added some fields for the _annot.json: | 16:24:54 |
dorahermes | Download image.png | 16:25:15 |
dorahermes | just a draft | 16:25:22 |
dorahermes | in BEP021 | 16:25:38 |
dorahermes | I guess this will change with current BEP003 discussions... | 16:26:11 |
mainakjas | how is the link relative if the derivative is independant? | 16:26:24 |
mainakjas | thanks @dor | 16:26:44 |
mainakjas | dorahermes: | 16:26:48 |
dorahermes | if you mark bad data segments on an original file, but are only sharing preprocessed data | 16:28:19 |
dorahermes | inputData =/sub-01/ses-01/eeg/..._eeg.<ext> | 16:28:52 |
dorahermes | IntendedFor =/derivatives/my_pipeline/sub-01/ses-01/eeg/...variant-filtered_eeg.<ext> | 16:29:27 |
mainakjas | the annotations are often referring to the data that is not yet preprocessed, right? Although I agree it could also point to the preprocessed data | 16:30:16 |
mainakjas | maybe let's jot down some examples? | 16:30:23 |
dorahermes | Both can happen. You can run an artifact detection algorithm on raw data and on epoched data. | 16:31:13 |
mainakjas | yes, so what would be inputData if you did not process your raw data? | 16:31:51 |
dorahermes | it would have the path relative to the BIDS root dir: /sub-01/ses-01/eeg/sub-01_ses-01_task-funtask_eeg.<ext> | 16:32:50 |
dorahermes | the same as intendedFor | 16:33:01 |
dorahermes | I a not sure whether we need intendedFor, or only input data | 16:33:31 |
mainakjas | me neither, I'm agnostic to either option ... | 16:34:04 |