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Bioinformatics Chat

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Bioinformatics chat about programming, tools, and projects in biology. For code discussions, join #biotechcode:matrix.org YouTube: https://bit.ly/2xzJXE8 Website: https://rebelscience.club/ News/Announcements: #BioNews:matrix.org32 Servers

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4 Mar 2021
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5 Mar 2021
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6 Mar 2021
@telegram_1172875641:tchncs.dechuma winner obiora (Telegram) joined the room.09:43:03
@telegram_1172875641:tchncs.dechuma winner obiora (Telegram)409:43:34
@telegram_1172875641:tchncs.dechuma winner obiora (Telegram)Servus aus Munchen! Ich bin ein student in Deggendorf, Bayern Germany und ich studere bioinformatics.09:44:26
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@telegram_272730026:tchncs.deForrest (Telegram)I used Canu to assembly bacteria genome (PacBio long raw read) and got several contigs. Though I viewed "removing the end overlaps in the tig" in Canu docs and followed the guide, I'm still not clear about the output in the doc. Does anyone know how to use MUMmer to find the end overlaps in a circular contig of bacteria?12:48:39
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@murillonasc:matrix.orgmurillonascHello guys, I'm looking for a programmer partner for my startup, I prefer young programmers, I'm 16, I want someone between (15-19) years old, contact me by my email: murillonascimento04@gmail.com16:37:08
@telegram_1437907806:tchncs.dePrs (Telegram) changed their display name from telegram_1437907806 to Prs (Telegram).17:10:25
@telegram_1437907806:tchncs.dePrs (Telegram)Hi, Which software would be best for nucleotide protein docking and for further analysis?17:10:22
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7 Mar 2021
@telegrambot:tchncs.deTelegram bridge bot
In reply to Prs (Telegram)
Hi,
Which software would be best for nucleotide protein docking and for further analysis?
Hey! There is no "the best" tool probably. There are libraries for Python like PyMOL or tools like Autodock, HEX Docking, ClusPro. I would suggest searching for "protein docking and analysis tool" on YouTube, quickly watching 3-5 videos about different tools and just go with the one that you understand better.
10:43:18
@telegram_1213229896:tchncs.deGanga Singh (Telegram) joined the room.13:14:22
@telegram_1437907806:tchncs.dePrs (Telegram)
In reply to @telegrambot:tchncs.de
Hey! There is no "the best" tool probably. There are libraries for Python like PyMOL or tools like Autodock, HEX Docking, ClusPro. I would suggest searching for "protein docking and analysis tool" on YouTube, quickly watching 3-5 videos about different tools and just go with the one that you understand better.
Okay, thank you.
13:38:41
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8 Mar 2021
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