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6 Aug 2020
@ehermes:matrix.orgEric Hermeshttps://gitlab.com/ase/ase/-/merge_requests/198820:57:09
@ehermes:matrix.orgEric HermesI am writing a test to prove that this MR fixes the problem.20:57:20
@ehermes:matrix.orgEric Hermesand also in the process refactoring the existing D3 tests20:57:34
@ehermes:matrix.orgEric Hermesso they are more pytest-y20:57:40
@askhl:matrix.orgaskhlSignificantly funnifying the cell of a physical system is likely to cause trouble with many calculators (convergence etc.)20:59:36
@ehermes:matrix.orgEric Hermes it's not that significant, is it? 20:59:55
@drfaustroll:matrix.orgalin m elenaso if just non-cubic21:00:07
@askhl:matrix.orgaskhlbut insignificantly doing it might mean that an error drowns in numerics21:00:08
@drfaustroll:matrix.orgalin m elenathere are some simple systems in gulp at least you can check against somethign else21:00:24
@chronum:matrix.orgchronumShouldn't 0.1 to 0.01 bet the sweet spot for that then?21:00:35
@askhl:matrix.orgaskhlIt should be a single-atom cell though. IMHO21:00:37
@askhl:matrix.orgaskhlif not HCP21:00:43
@ehermes:matrix.orgEric HermesI'd prefer something main-group21:01:17
@drfaustroll:matrix.orgalin m elena askhl: 2 atoms 21:01:43
@askhl:matrix.orgaskhlCan it be graphite?21:01:45
@ehermes:matrix.orgEric Hermes I thought graphene had a 2 atom cell. and graphite definitely has at least 2 atoms 21:02:27
@drfaustroll:matrix.orgalin m elenacell 4.7602 4.7602 12.9933 90.000000 90.000000 120.0 frac Al core 0.000000 0.000000 0.352160 O core 0.306240 0.000000 0.250000 space 167 21:02:31
@drfaustroll:matrix.orgalin m elenathis will end up with more due to spacegroup21:02:55
@ehermes:matrix.orgEric Hermes what about bulk('Al') 21:03:27
@askhl:matrix.orgaskhlAl is fcc21:03:35
@ehermes:matrix.orgEric Hermesit's not HCP (I'm not sure why you want HCP)21:03:36
@askhl:matrix.orgaskhlHCP has an asymmetric cell21:03:51
@askhl:matrix.orgaskhlBut we can also do a perturbed FCC21:04:02
@askhl:matrix.orgaskhlI guess Al will be fine21:04:06
@askhl:matrix.orgaskhl+1 to perturbed fcc Al21:04:20
@ehermes:matrix.orgEric Hermes ok. I'm just doing this in test_dftd3.py for now anyway 21:04:34
@ehermes:matrix.orgEric Hermesbut if we find the structure sufficiently useful we can move it somewhere more convenient for other tests.21:04:47
@askhl:matrix.orgaskhlYes21:04:55
@askhl:matrix.orgaskhl Eric Hermes: do you think the pytest calculator listing in !1975 is all right? 21:08:03
@ehermes:matrix.orgEric HermesI haven't had an opportunity to look at it in detail21:08:31

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